CRISPRone

CRISPRone report for GCA_003629685.1_ASM362968v1

♦ Seq 1: RAEK01000161.1 Pseudomonas aeruginosa strain HUM-232 NODE_6_length_227660_cov_13.0893_ID_11, whole genome shotgun sequence

⇒Summary: seq-len = 227660 bp; # of CRISPR array = 0; # of cas gene = 3  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 190672-194453 bp Zoom in on locus 1 Gene: COG1199:DinG Type: Subtype-IV-A Location: 190672-192750 bp Gene: pfam13280:WYL Type: other Location: 192752-193657 bp Gene: pfam09002:csx1 Type: Type-III Location: 193989-194453 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RAEK01000168.1 Pseudomonas aeruginosa strain HUM-232 NODE_150_length_547_cov_1.94919_ID_299, whole genome shotgun sequence

⇒Summary: seq-len = 547 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-442 bp Zoom in on locus 1 x8 CRISPR array Location: 0-442 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 0-442 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-442 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)