CRISPRone

CRISPRone report for GCA_003629795.1_ASM362979v1

♦ Seq 1: RAEF01000066.1 Pseudomonas aeruginosa strain HUM-298 NODE_106_length_5851_cov_8.20048_ID_211, whole genome shotgun sequence

⇒Summary: seq-len = 5851 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 5019-5768 bp Zoom in on locus 1 x13 CRISPR array Location: 5019-5768 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 5019-5768 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 5019-5768 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RAEF01000118.1 Pseudomonas aeruginosa strain HUM-298 NODE_58_length_40317_cov_17.6831_ID_115, whole genome shotgun sequence

⇒Summary: seq-len = 40317 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 39150-40258 bp Zoom in on locus 1 x19 CRISPR array Location: 39150-40258 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 39150-40258 bp Num of repeats: 19 Spacers: s1-s18 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 39150-40258 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: RAEF01000006.1 Pseudomonas aeruginosa strain HUM-298 NODE_101_length_9459_cov_8.50074_ID_201, whole genome shotgun sequence

⇒Summary: seq-len = 9459 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 279-9399 bp Zoom in on locus 1 x8 Gene: cd09718:cas1 Type: universal Location: 279-1256 bp Gene: COG1203:cas3 Type: Type-I Location: 1253-4483 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 4894-6195 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6182-7165 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7176-8204 bp Gene: cd09739:cas6f Type: other Location: 8208-8771 bp CRISPR array Location: 8956-9399 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 8956-9399 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8956-9399 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: RAEF01000034.1 Pseudomonas aeruginosa strain HUM-298 NODE_16_length_111707_cov_16.3726_ID_31, whole genome shotgun sequence

⇒Summary: seq-len = 111707 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 61-690 bp Zoom in on locus 1 x11 CRISPR array Location: 61-690 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 61-690 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 61-690 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)