CRISPRone

CRISPRone report for GCA_003630045.1_ASM363004v1

♦ Seq 1: RADS01000038.1 Pseudomonas aeruginosa strain VET-76 PA2_C10_NODE_14_length_70171_cov_24.0128_ID_27, whole genome shotgun sequence

⇒Summary: seq-len = 70171 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38059-48564 bp Zoom in on locus 1 x23 x9 CRISPR array Location: 38059-39407 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 38059-39407 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09739:cas6f Type: other Location: 39657-40220 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 40224-41252 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 41263-42246 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 42233-43537 bp Gene: COG1203:cas3 Type: Type-I Location: 43595-46825 bp Gene: cd09718:cas1 Type: universal Location: 46822-47796 bp CRISPR array Location: 48057-48564 bp Num of repeats: 9 Spacers: s23-s30 CRISPR array Location: 48057-48564 bp Num of repeats: 9 Spacers: s23-s30 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38059-39407 bp]: array | spacers
           [Locus range 48057-48564 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)