CRISPRone

CRISPRone report for GCA_003630055.1_ASM363005v1

♦ Seq 1: RADR01000180.1 Pseudomonas aeruginosa strain VET-75 PA2_B10_NODE_29_length_36764_cov_21.1667_ID_57, whole genome shotgun sequence

⇒Summary: seq-len = 36764 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21608-32113 bp Zoom in on locus 1 x9 x23 CRISPR array Location: 21608-22116 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 21608-22116 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09718:cas1 Type: universal Location: 22376-23350 bp Gene: COG1203:cas3 Type: Type-I Location: 23347-26577 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 26635-27939 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 27926-28909 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 28920-29948 bp Gene: cd09739:cas6f Type: other Location: 29952-30515 bp CRISPR array Location: 30766-32113 bp Num of repeats: 23 Spacers: s9-s30 CRISPR array Location: 30766-32113 bp Num of repeats: 23 Spacers: s9-s30 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21608-22116 bp]: array | spacers
           [Locus range 30766-32113 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)