CRISPRone

CRISPRone report for GCA_003630195.1_ASM363019v1

♦ Seq 1: RADK01000084.1 Pseudomonas aeruginosa strain HUM-337 NODE_36_length_76215_cov_23.6473_ID_71, whole genome shotgun sequence

⇒Summary: seq-len = 76215 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 28207-38887 bp Zoom in on locus 1 x22 x14 CRISPR array Location: 28207-29495 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 28207-29495 bp Num of repeats: 22 Spacers: s1-s21 Gene: cd09718:cas1 Type: universal Location: 29755-30729 bp Gene: COG1203:cas3 Type: Type-I Location: 30726-33956 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 34014-35318 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 35305-36288 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 36299-37327 bp Gene: cd09739:cas6f Type: other Location: 37331-37894 bp CRISPR array Location: 38079-38887 bp Num of repeats: 14 Spacers: s22-s34 CRISPR array Location: 38079-38887 bp Num of repeats: 14 Spacers: s22-s34 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 28207-29495 bp]: array | spacers
           [Locus range 38079-38887 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RADK01000044.1 Pseudomonas aeruginosa strain HUM-337 NODE_17_length_119587_cov_29.1513_ID_33, whole genome shotgun sequence

⇒Summary: seq-len = 119587 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 26096-39271 bp Zoom in on locus 1 Gene: cd06127:DEDDh Type: Type-I Location: 26096-26641 bp Gene: unk Type: unknown Location: 34537-35001 bp Gene: mkCas0071:csa5gr11 Type: Subtype-I-A Location: 35126-37111 bp Gene: unk Type: unknown Location: 37154-38203 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 38354-39271 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)