CRISPRone

CRISPRone report for GCA_003630235.1_ASM363023v1

♦ Seq 1: RADI01000124.1 Pseudomonas aeruginosa strain VET-43 NODE_2_length_508847_cov_31.4146_ID_3, whole genome shotgun sequence

⇒Summary: seq-len = 508847 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 207069-216354 bp Zoom in on locus 1 x23 Gene: cd09641:cas3HD Type: Type-I Location: 207069-209303 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 209353-210027 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 210024-211817 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 211814-212683 bp Gene: pfam01930:cas4 Type: Type-I Location: 212702-213334 bp Gene: cd09721:cas1 Type: universal Location: 213338-214378 bp Gene: cd09725:cas2 Type: universal Location: 214388-214678 bp CRISPR array Location: 214858-216354 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 214858-216354 bp Num of repeats: 23 Spacers: s1-s22 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 214858-216354 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)