CRISPRone

CRISPRone report for GCA_003630505.1_ASM363050v1

♦ Seq 1: RACV01000192.1 Pseudomonas aeruginosa strain VET-62 PA2_H6_NODE_168_length_12053_cov_9.38432_ID_335, whole genome shotgun sequence

⇒Summary: seq-len = 12053 bp; # of CRISPR array = 1; # of cas gene = 4  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 140-4891 bp Zoom in on locus 1 x12 Gene: pfam09611:cas8f Type: Subtype-I-F Location: 140-1444 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1431-2414 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2425-3453 bp Gene: cd09739:cas6f Type: other Location: 3457-4020 bp CRISPR array Location: 4204-4891 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 4204-4891 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 4204-4891 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RACV01000513.1 Pseudomonas aeruginosa strain VET-62 PA2_H6_NODE_375_length_5199_cov_6.63902_ID_749, whole genome shotgun sequence

⇒Summary: seq-len = 5199 bp; # of CRISPR array = 1; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-5068 bp Zoom in on locus 1 x11 Gene: COG1203:cas3 Type: Type-I Location: 3-3209 bp Gene: cd09718:cas1 Type: universal Location: 3206-4180 bp CRISPR array Location: 4441-5068 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 4441-5068 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 4441-5068 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: RACV01000059.1 Pseudomonas aeruginosa strain VET-62 PA2_H6_NODE_137_length_14555_cov_9.70977_ID_273, whole genome shotgun sequence

⇒Summary: seq-len = 14555 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 13136-14424 bp Zoom in on locus 1 x22 CRISPR array Location: 13136-14424 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 13136-14424 bp Num of repeats: 22 Spacers: s1-s21 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 13136-14424 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)