CRISPRone

CRISPRone report for GCA_003630525.1_ASM363052v1

♦ Seq 1: RACU01000185.1 Pseudomonas aeruginosa strain HUM-293 NODE_1_length_398649_cov_42.5074_ID_1, whole genome shotgun sequence

⇒Summary: seq-len = 398649 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 148669-149717 bp Zoom in on locus 1 x18 CRISPR array Location: 148669-149717 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 148669-149717 bp Num of repeats: 18 Spacers: s1-s17 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 148669-149717 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RACU01000398.1 Pseudomonas aeruginosa strain HUM-293 NODE_62_length_24805_cov_40.8149_ID_123, whole genome shotgun sequence

⇒Summary: seq-len = 24805 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 13706-24291 bp Zoom in on locus 1 Gene: cls000170:cas4 Type: Type-I Location: 13706-15250 bp Gene: unk Type: unknown Location: 16334-16513 bp Gene: unk Type: unknown Location: 16697-17095 bp Gene: pfam00078:RT Type: other Location: 17245-18513 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 23422-24291 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)