CRISPRone

CRISPRone report for GCA_003630575.1_ASM363057v1

♦ Seq 1: RACS01000030.1 Pseudomonas aeruginosa strain HUM-8 repl2 NODE_17_length_121906_cov_29.6054_ID_33, whole genome shotgun sequence

⇒Summary: seq-len = 121906 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 121409-121796 bp Zoom in on locus 1 x7 CRISPR array Location: 121409-121796 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 121409-121796 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 121409-121796 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RACS01000095.1 Pseudomonas aeruginosa strain HUM-8 repl2 NODE_41_length_48637_cov_27.0456_ID_81, whole genome shotgun sequence

⇒Summary: seq-len = 48637 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 111-10610 bp Zoom in on locus 1 x16 x17 CRISPR array Location: 111-1039 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 111-1039 bp Num of repeats: 16 Spacers: s1-s15 Gene: cd09718:cas1 Type: universal Location: 1300-2274 bp Gene: COG1203:cas3 Type: Type-I Location: 2271-5501 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5559-6863 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6850-7833 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7844-8872 bp Gene: cd09739:cas6f Type: other Location: 8876-9439 bp CRISPR array Location: 9622-10610 bp Num of repeats: 17 Spacers: s16-s31 CRISPR array Location: 9622-10610 bp Num of repeats: 17 Spacers: s16-s31 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 111-1039 bp]: array | spacers
           [Locus range 9622-10610 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)