CRISPRone

CRISPRone report for GCA_003630635.1_ASM363063v1

♦ Seq 1: RACO01000080.1 Pseudomonas aeruginosa strain VET-21 NODE_2_length_496173_cov_26.4667_ID_3, whole genome shotgun sequence

⇒Summary: seq-len = 496173 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 479755-490267 bp Zoom in on locus 1 x9 x13 CRISPR array Location: 479755-480273 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 479755-480273 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 481046-483727 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 483730-485298 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 485295-485825 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 485835-486977 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 486979-487641 bp Gene: pfam08798:cas6e Type: other Location: 487616-488227 bp Gene: cd09719:cas1 Type: universal Location: 488254-489144 bp Gene: pfam09707:cas2 Type: universal Location: 489141-489440 bp CRISPR array Location: 489505-490267 bp Num of repeats: 13 Spacers: s9-s20 CRISPR array Location: 489505-490267 bp Num of repeats: 13 Spacers: s9-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 479755-480273 bp]: array | spacers
           [Locus range 489505-490267 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)