CRISPRone

CRISPRone report for GCA_003630665.1_ASM363066v1

♦ Seq 1: RACN01000298.1 Pseudomonas aeruginosa strain ENV-203 PA2_E1_NODE_217_length_6741_cov_13.086_ID_433, whole genome shotgun sequence

⇒Summary: seq-len = 6741 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 712-1229 bp Zoom in on locus 1 x9 CRISPR array Location: 712-1229 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 712-1229 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 712-1229 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RACN01000098.1 Pseudomonas aeruginosa strain ENV-203 PA2_E1_NODE_46_length_43460_cov_11.5787_ID_91, whole genome shotgun sequence

⇒Summary: seq-len = 43460 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 140-9361 bp Zoom in on locus 1 x13 Gene: cd09641:cas3HD Type: Type-I Location: 140-2821 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 2824-4392 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 4389-4919 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 4929-6071 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 6073-6735 bp Gene: pfam08798:cas6e Type: other Location: 6710-7321 bp Gene: cd09719:cas1 Type: universal Location: 7348-8238 bp Gene: pfam09707:cas2 Type: universal Location: 8235-8534 bp CRISPR array Location: 8599-9361 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 8599-9361 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8599-9361 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)