CRISPRone

CRISPRone report for GCA_003630695.1_ASM363069v1

♦ Seq 1: RACM01000072.1 Pseudomonas aeruginosa strain HUM-252 PA3_F3_NODE_1_length_398333_cov_45.5753_ID_1, whole genome shotgun sequence

⇒Summary: seq-len = 398333 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 161310-171821 bp Zoom in on locus 1 x13 x9 CRISPR array Location: 161310-162071 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 161310-162071 bp Num of repeats: 13 Spacers: s1-s12 Gene: pfam09707:cas2 Type: universal Location: 162136-162435 bp Gene: cd09719:cas1 Type: universal Location: 162432-163322 bp Gene: pfam08798:cas6e Type: other Location: 163349-163888 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 163935-164597 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 164599-165741 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 165751-166281 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 166278-167846 bp Gene: cd09641:cas3HD Type: Type-I Location: 167849-170530 bp CRISPR array Location: 171304-171821 bp Num of repeats: 9 Spacers: s13-s20 CRISPR array Location: 171304-171821 bp Num of repeats: 9 Spacers: s13-s20 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 161310-162071 bp]: array | spacers
           [Locus range 171304-171821 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RACM01000009.1 Pseudomonas aeruginosa strain HUM-252 PA3_F3_NODE_42_length_52182_cov_47.4971_ID_83, whole genome shotgun sequence

⇒Summary: seq-len = 52182 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 9298-19883 bp Zoom in on locus 1 Gene: COG0640:csa3 Type: Subtype-I-A Location: 9298-10167 bp Gene: pfam00078:RT Type: other Location: 15076-16344 bp Gene: unk Type: unknown Location: 16494-16892 bp Gene: unk Type: unknown Location: 17076-17255 bp Gene: cls000170:cas4 Type: Type-I Location: 18339-19883 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)