CRISPRone

CRISPRone report for GCA_003631145.1_ASM363114v1

♦ Seq 1: RABO01000249.1 Pseudomonas aeruginosa strain ENV-681 PA4_B5_NODE_7_length_142282_cov_55.2641_ID_13, whole genome shotgun sequence

⇒Summary: seq-len = 142282 bp; # of CRISPR array = 3; # of cas gene = 9  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 25337-36090 bp Zoom in on locus 1 x14 x6 x5 CRISPR array Location: 25337-26158 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 25337-26158 bp Num of repeats: 14 Spacers: s1-s13 Gene: pfam09707:cas2 Type: universal Location: 26223-26522 bp Gene: COG1518:cas1 Type: universal Location: 26519-27121 bp Gene: cd09719:cas1 Type: universal Location: 27170-27409 bp Gene: pfam08798:cas6e Type: other Location: 27436-27975 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 28022-28684 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 28686-29828 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 29838-30368 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 30365-31933 bp Gene: cd09641:cas3HD Type: Type-I Location: 31936-34617 bp CRISPR array Location: 35390-35723 bp Num of repeats: 6 Spacers: s14-s18 CRISPR array Location: 35390-35723 bp Num of repeats: 6 Spacers: s14-s18 CRISPR array Location: 35818-36090 bp Num of repeats: 5 Spacers: s19-s22 CRISPR array Location: 35818-36090 bp Num of repeats: 5 Spacers: s19-s22 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 25337-26158 bp]: array | spacers
           [Locus range 35390-35723 bp]: array | spacers
           [Locus range 35818-36090 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)