CRISPRone

CRISPRone report for GCA_003631245.1_ASM363124v1

♦ Seq 1: RABK01000029.1 Pseudomonas aeruginosa strain HUM-278 PA3_E6_NODE_40_length_48761_cov_28.6845_ID_79, whole genome shotgun sequence

⇒Summary: seq-len = 48761 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 83-11412 bp Zoom in on locus 1 x18 x23 CRISPR array Location: 83-1131 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 83-1131 bp Num of repeats: 18 Spacers: s1-s17 Gene: cd09718:cas1 Type: universal Location: 1391-2365 bp Gene: COG1203:cas3 Type: Type-I Location: 2362-5592 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6003-7304 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7291-8274 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8285-9313 bp Gene: cd09739:cas6f Type: other Location: 9317-9880 bp CRISPR array Location: 10064-11412 bp Num of repeats: 23 Spacers: s18-s39 CRISPR array Location: 10064-11412 bp Num of repeats: 23 Spacers: s18-s39 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 83-1131 bp]: array | spacers
           [Locus range 10064-11412 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RABK01000108.1 Pseudomonas aeruginosa strain HUM-278 PA3_E6_NODE_17_length_115092_cov_33.2604_ID_33, whole genome shotgun sequence

⇒Summary: seq-len = 115092 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 114082-115010 bp Zoom in on locus 1 x16 CRISPR array Location: 114082-115010 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 114082-115010 bp Num of repeats: 16 Spacers: s1-s15 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 114082-115010 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)