CRISPRone

CRISPRone report for GCA_003631675.1_ASM363167v1

♦ Seq 1: RAAL01000313.1 Pseudomonas aeruginosa strain VET-28 PA2_G12_NODE_315_length_4037_cov_36.1591_ID_629, whole genome shotgun sequence

⇒Summary: seq-len = 4037 bp; # of CRISPR array = 1; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-3906 bp Zoom in on locus 1 x24 Gene: cd09673:cas3f Type: Subtype-I-F Location: 1-1266 bp Gene: cd09718:cas1 Type: universal Location: 1263-2237 bp CRISPR array Location: 2498-3906 bp Num of repeats: 24 Spacers: s1-s23 CRISPR array Location: 2498-3906 bp Num of repeats: 24 Spacers: s1-s23 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2498-3906 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RAAL01000290.1 Pseudomonas aeruginosa strain VET-28 PA2_G12_NODE_284_length_5125_cov_30.4449_ID_567, whole genome shotgun sequence

⇒Summary: seq-len = 5125 bp; # of CRISPR array = 0; # of cas gene = 4  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-5123 bp Zoom in on locus 1 Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1-741 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 752-1735 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 1722-3026 bp Gene: COG1203:cas3 Type: Type-I Location: 3084-5123 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: RAAL01000225.1 Pseudomonas aeruginosa strain VET-28 PA2_G12_NODE_41_length_40133_cov_26.7768_ID_81, whole genome shotgun sequence

⇒Summary: seq-len = 40133 bp; # of CRISPR array = 1; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38210-40131 bp Zoom in on locus 1 x14 CRISPR array Location: 38210-39018 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 38210-39018 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09739:cas6f Type: other Location: 39202-39765 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39769-40131 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38210-39018 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)