CRISPRone

CRISPRone report for GCA_003631755.1_ASM363175v1

♦ Seq 1: RAAH01000004.1 Pseudomonas aeruginosa strain HUM-279 PA3_F6_NODE_152_length_2698_cov_47.4975_ID_303, whole genome shotgun sequence

⇒Summary: seq-len = 2698 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 413-982 bp Zoom in on locus 1 x10 CRISPR array Location: 413-982 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 413-982 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 413-982 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RAAH01000051.1 Pseudomonas aeruginosa strain HUM-279 PA3_F6_NODE_42_length_49420_cov_34.2341_ID_83, whole genome shotgun sequence

⇒Summary: seq-len = 49420 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 411-11211 bp Zoom in on locus 1 x24 x14 CRISPR array Location: 411-1820 bp Num of repeats: 24 Spacers: s1-s23 CRISPR array Location: 411-1820 bp Num of repeats: 24 Spacers: s1-s23 Gene: cd09718:cas1 Type: universal Location: 2080-3054 bp Gene: COG1203:cas3 Type: Type-I Location: 3051-6281 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6339-7643 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7630-8613 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8624-9652 bp Gene: cd09739:cas6f Type: other Location: 9656-10219 bp CRISPR array Location: 10404-11211 bp Num of repeats: 14 Spacers: s24-s36 CRISPR array Location: 10404-11211 bp Num of repeats: 14 Spacers: s24-s36 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 411-1820 bp]: array | spacers
           [Locus range 10404-11211 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)