CRISPRone

CRISPRone report for GCA_003631905.1_ASM363190v1

♦ Seq 1: QZZW01000014.1 Pseudomonas aeruginosa strain HUM-262 PA3_G4_NODE_48_length_37991_cov_29.2096_ID_95, whole genome shotgun sequence

⇒Summary: seq-len = 37991 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 27060-37860 bp Zoom in on locus 1 x14 x24 CRISPR array Location: 27060-27868 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 27060-27868 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09739:cas6f Type: other Location: 28052-28615 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 28619-29647 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 29658-30641 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 30628-31932 bp Gene: COG1203:cas3 Type: Type-I Location: 31990-35220 bp Gene: cd09718:cas1 Type: universal Location: 35217-36191 bp CRISPR array Location: 36452-37860 bp Num of repeats: 24 Spacers: s14-s36 CRISPR array Location: 36452-37860 bp Num of repeats: 24 Spacers: s14-s36 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 27060-27868 bp]: array | spacers
           [Locus range 36452-37860 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QZZW01000013.1 Pseudomonas aeruginosa strain HUM-262 PA3_G4_NODE_52_length_30177_cov_39.975_ID_103, whole genome shotgun sequence

⇒Summary: seq-len = 30177 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 132-701 bp Zoom in on locus 1 x10 CRISPR array Location: 132-701 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 132-701 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 132-701 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)