CRISPRone

CRISPRone report for GCA_003632125.1_ASM363212v1

♦ Seq 1: QZZA01000071.1 Pseudomonas aeruginosa strain HUM-237 NODE_30_length_77913_cov_14.684_ID_59, whole genome shotgun sequence

⇒Summary: seq-len = 77913 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 55570-67608 bp Zoom in on locus 1 x18 x29 CRISPR array Location: 55570-56636 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 55570-56636 bp Num of repeats: 18 Spacers: s1-s17 Gene: cd09641:cas3HD Type: Type-I Location: 57410-60091 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 60094-61662 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 61659-62189 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 62199-63341 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 63343-64005 bp Gene: pfam08798:cas6e Type: other Location: 63980-64591 bp Gene: cd09719:cas1 Type: universal Location: 64618-65508 bp Gene: pfam09707:cas2 Type: universal Location: 65505-65804 bp CRISPR array Location: 65869-67608 bp Num of repeats: 29 Spacers: s18-s45 CRISPR array Location: 65869-67608 bp Num of repeats: 29 Spacers: s18-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 55570-56636 bp]: array | spacers
           [Locus range 65869-67608 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)