CRISPRone

CRISPRone report for GCA_003632165.1_ASM363216v1

♦ Seq 1: QZYX01000141.1 Pseudomonas aeruginosa strain HUM-254 PA3_H3_NODE_5_length_209220_cov_32.9879_ID_9, whole genome shotgun sequence

⇒Summary: seq-len = 209220 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 65406-76956 bp Zoom in on locus 1 x17 x22 CRISPR array Location: 65406-66411 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 65406-66411 bp Num of repeats: 17 Spacers: s1-s16 Gene: cd09641:cas3HD Type: Type-I Location: 67185-69866 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 69869-71437 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 71434-71964 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 71974-73116 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 73118-73780 bp Gene: pfam08798:cas6e Type: other Location: 73755-74366 bp Gene: cd09719:cas1 Type: universal Location: 74393-75283 bp Gene: pfam09707:cas2 Type: universal Location: 75280-75579 bp CRISPR array Location: 75644-76956 bp Num of repeats: 22 Spacers: s17-s37 CRISPR array Location: 75644-76956 bp Num of repeats: 22 Spacers: s17-s37 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 65406-66411 bp]: array | spacers
           [Locus range 75644-76956 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QZYX01000120.1 Pseudomonas aeruginosa strain HUM-254 PA3_H3_NODE_29_length_76822_cov_27.6452_ID_57, whole genome shotgun sequence

⇒Summary: seq-len = 76822 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37580-48369 bp Zoom in on locus 1 x18 x20 CRISPR array Location: 37580-38628 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 37580-38628 bp Num of repeats: 18 Spacers: s1-s17 Gene: cd09739:cas6f Type: other Location: 38811-39374 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39378-40406 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40417-41400 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41387-42691 bp Gene: COG1203:cas3 Type: Type-I Location: 42749-45979 bp Gene: cd09718:cas1 Type: universal Location: 45976-46950 bp CRISPR array Location: 47202-48369 bp Num of repeats: 20 Spacers: s18-s36 CRISPR array Location: 47202-48369 bp Num of repeats: 20 Spacers: s18-s36 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37580-38628 bp]: array | spacers
           [Locus range 47202-48369 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)