CRISPRone

CRISPRone report for GCA_003632335.1_ASM363233v1

♦ Seq 1: QZYN01000312.1 Pseudomonas aeruginosa strain HUM-322-D2 PA2_B5_NODE_52_length_34919_cov_19.5155_ID_103, whole genome shotgun sequence

⇒Summary: seq-len = 34919 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3650-14094 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 3650-4338 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 3650-4338 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 4587-5150 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 5154-6182 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6193-7176 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 7163-8467 bp Gene: COG1203:cas3 Type: Type-I Location: 8525-11755 bp Gene: cd09718:cas1 Type: universal Location: 11752-12726 bp CRISPR array Location: 12987-14094 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 12987-14094 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 3650-4338 bp]: array | spacers
           [Locus range 12987-14094 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)