CRISPRone

CRISPRone report for GCA_003632345.1_ASM363234v1

♦ Seq 1: QZYM01000146.1 Pseudomonas aeruginosa strain ENV-209 PA2_B2_NODE_30_length_56071_cov_20.4779_ID_59, whole genome shotgun sequence

⇒Summary: seq-len = 56071 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 23798-34242 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 23798-24486 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 23798-24486 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 24735-25298 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 25302-26330 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 26341-27324 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 27311-28615 bp Gene: COG1203:cas3 Type: Type-I Location: 28673-31903 bp Gene: cd09718:cas1 Type: universal Location: 31900-32874 bp CRISPR array Location: 33135-34242 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 33135-34242 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 23798-24486 bp]: array | spacers
           [Locus range 33135-34242 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)