CRISPRone

CRISPRone report for GCA_003632355.1_ASM363235v1

♦ Seq 1: QZYL01000094.1 Pseudomonas aeruginosa strain ENV-227 PA2_C2_NODE_20_length_68725_cov_21.8963_ID_39, whole genome shotgun sequence

⇒Summary: seq-len = 68725 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 20825-32170 bp Zoom in on locus 1 x23 x23 CRISPR array Location: 20825-22173 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 20825-22173 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 22433-23407 bp Gene: COG1203:cas3 Type: Type-I Location: 23404-26634 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 26692-27996 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 27983-28966 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 28977-30005 bp Gene: cd09739:cas6f Type: other Location: 30009-30572 bp CRISPR array Location: 30822-32170 bp Num of repeats: 23 Spacers: s23-s44 CRISPR array Location: 30822-32170 bp Num of repeats: 23 Spacers: s23-s44 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 20825-22173 bp]: array | spacers
           [Locus range 30822-32170 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)