CRISPRone

CRISPRone report for GCA_003632405.1_ASM363240v1

♦ Seq 1: QZYI01000088.1 Pseudomonas aeruginosa strain HUM-260 PA3_E4_NODE_35_length_67824_cov_31.072_ID_69, whole genome shotgun sequence

⇒Summary: seq-len = 67824 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 20825-31269 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 20825-21933 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 20825-21933 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 22193-23167 bp Gene: COG1203:cas3 Type: Type-I Location: 23164-26394 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 26452-27756 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 27743-28726 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 28737-29765 bp Gene: cd09739:cas6f Type: other Location: 29769-30332 bp CRISPR array Location: 30582-31269 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 30582-31269 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 20825-21933 bp]: array | spacers
           [Locus range 30582-31269 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)