CRISPRone

CRISPRone report for GCA_003632465.1_ASM363246v1

♦ Seq 1: QZYG01000186.1 Pseudomonas aeruginosa strain HUM-247 NODE_32_length_80135_cov_13.9707_ID_63, whole genome shotgun sequence

⇒Summary: seq-len = 80135 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36540-46984 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 36540-37228 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 36540-37228 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 37477-38040 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38044-39072 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39083-40066 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40053-41357 bp Gene: COG1203:cas3 Type: Type-I Location: 41415-44645 bp Gene: cd09718:cas1 Type: universal Location: 44642-45616 bp CRISPR array Location: 45877-46984 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 45877-46984 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36540-37228 bp]: array | spacers
           [Locus range 45877-46984 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)