CRISPRone

CRISPRone report for GCA_003632575.1_ASM363257v1

♦ Seq 1: QZXR01000061.1 Pseudomonas aeruginosa strain ENV-570 PA4_B4_NODE_15_length_137930_cov_49.4404_ID_29, whole genome shotgun sequence

⇒Summary: seq-len = 137930 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 110319-112323 bp Zoom in on locus 1 x10 x2 CRISPR array Location: 110319-110886 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 110319-110886 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 112235-112323 bp Num of repeats: 2 Spacers: s10-s10 CRISPR array Location: 112235-112323 bp Num of repeats: 2 Spacers: s10-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 110319-110886 bp]: array | spacers
           [Locus range 112235-112323 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QZXR01000064.1 Pseudomonas aeruginosa strain ENV-570 PA4_B4_NODE_8_length_197429_cov_44.5709_ID_15, whole genome shotgun sequence

⇒Summary: seq-len = 197429 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 106054-106741 bp Zoom in on locus 1 x12 CRISPR array Location: 106054-106741 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 106054-106741 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 106054-106741 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QZXR01000007.1 Pseudomonas aeruginosa strain ENV-570 PA4_B4_NODE_30_length_70100_cov_42.2221_ID_59, whole genome shotgun sequence

⇒Summary: seq-len = 70100 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 14167-14494 bp Zoom in on locus 1 x6 CRISPR array Location: 14167-14494 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 14167-14494 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 14167-14494 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QZXR01000065.1 Pseudomonas aeruginosa strain ENV-570 PA4_B4_NODE_28_length_76736_cov_43.872_ID_55, whole genome shotgun sequence

⇒Summary: seq-len = 76736 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 71877-72386 bp Zoom in on locus 1 x9 CRISPR array Location: 71877-72386 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 71877-72386 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 71877-72386 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QZXR01000032.1 Pseudomonas aeruginosa strain ENV-570 PA4_B4_NODE_71_length_10402_cov_47.96_ID_141, whole genome shotgun sequence

⇒Summary: seq-len = 10402 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 976-10067 bp Zoom in on locus 1 x12 CRISPR array Location: 976-1664 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 976-1664 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09718:cas1 Type: universal Location: 1928-2902 bp Gene: COG1203:cas3 Type: Type-I Location: 2899-6129 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6187-7491 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7478-8461 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8472-9500 bp Gene: cd09739:cas6f Type: other Location: 9504-10067 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 976-1664 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)