CRISPRone

CRISPRone report for GCA_003632585.1_ASM363258v1

♦ Seq 1: QZXQ01000241.1 Pseudomonas aeruginosa strain HUM-250 NODE_131_length_4866_cov_16.8453_ID_261, whole genome shotgun sequence

⇒Summary: seq-len = 4866 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4330-4838 bp Zoom in on locus 1 x9 CRISPR array Location: 4330-4838 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 4330-4838 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 4330-4838 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QZXQ01000282.1 Pseudomonas aeruginosa strain HUM-250 NODE_169_length_1019_cov_22.0322_ID_337, whole genome shotgun sequence

⇒Summary: seq-len = 1019 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 229-976 bp Zoom in on locus 1 x13 CRISPR array Location: 229-976 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 229-976 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 229-976 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QZXQ01000091.1 Pseudomonas aeruginosa strain HUM-250 NODE_74_length_25860_cov_20.4579_ID_147, whole genome shotgun sequence

⇒Summary: seq-len = 25860 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 25640-25727 bp Zoom in on locus 1 x2 CRISPR array Location: 25640-25727 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 25640-25727 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 25640-25727 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QZXQ01000149.1 Pseudomonas aeruginosa strain HUM-250 NODE_58_length_37875_cov_13.5939_ID_115, whole genome shotgun sequence

⇒Summary: seq-len = 37875 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 104-551 bp Zoom in on locus 1 x8 CRISPR array Location: 104-551 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 104-551 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 104-551 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QZXQ01000082.1 Pseudomonas aeruginosa strain HUM-250 NODE_83_length_19630_cov_20.2286_ID_165, whole genome shotgun sequence

⇒Summary: seq-len = 19630 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 18800-19307 bp Zoom in on locus 1 x9 CRISPR array Location: 18800-19307 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 18800-19307 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 18800-19307 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QZXQ01000187.1 Pseudomonas aeruginosa strain HUM-250 NODE_37_length_58503_cov_14.3178_ID_73, whole genome shotgun sequence

⇒Summary: seq-len = 58503 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 58210-58477 bp Zoom in on locus 1 x5 CRISPR array Location: 58210-58477 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 58210-58477 bp Num of repeats: 5 Spacers: s1-s4 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 58210-58477 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QZXQ01000205.1 Pseudomonas aeruginosa strain HUM-250 NODE_113_length_9541_cov_15.9128_ID_225, whole genome shotgun sequence

⇒Summary: seq-len = 9541 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 27-9449 bp Zoom in on locus 1 x11 x4 CRISPR array Location: 27-655 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 27-655 bp Num of repeats: 11 Spacers: s1-s10 Gene: cd09718:cas1 Type: universal Location: 919-1893 bp Gene: COG1203:cas3 Type: Type-I Location: 1890-5120 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5178-6482 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6469-7452 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7463-8491 bp Gene: cd09739:cas6f Type: other Location: 8495-9058 bp CRISPR array Location: 9242-9449 bp Num of repeats: 4 Spacers: s11-s13 CRISPR array Location: 9242-9449 bp Num of repeats: 4 Spacers: s11-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 27-655 bp]: array | spacers
           [Locus range 9242-9449 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)