CRISPRone

CRISPRone report for GCA_003632625.1_ASM363262v1

♦ Seq 1: QZXM01000148.1 Pseudomonas aeruginosa strain VET-68 PA2_F7_NODE_55_length_30827_cov_16.2998_ID_109, whole genome shotgun sequence

⇒Summary: seq-len = 30827 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21233-30724 bp Zoom in on locus 1 x20 CRISPR array Location: 21233-22402 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 21233-22402 bp Num of repeats: 20 Spacers: s1-s19 Gene: cd09739:cas6f Type: other Location: 22585-23148 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 23152-24180 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 24191-25174 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 25161-26465 bp Gene: COG1203:cas3 Type: Type-I Location: 26523-29753 bp Gene: cd09718:cas1 Type: universal Location: 29750-30724 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21233-22402 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QZXM01000305.1 Pseudomonas aeruginosa strain VET-68 PA2_F7_NODE_316_length_2026_cov_26.0756_ID_631, whole genome shotgun sequence

⇒Summary: seq-len = 2026 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 358-1947 bp Zoom in on locus 1 x27 CRISPR array Location: 358-1947 bp Num of repeats: 27 Spacers: s1-s26 CRISPR array Location: 358-1947 bp Num of repeats: 27 Spacers: s1-s26 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 358-1947 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QZXM01000069.1 Pseudomonas aeruginosa strain VET-68 PA2_F7_NODE_142_length_12613_cov_13.7794_ID_283, whole genome shotgun sequence

⇒Summary: seq-len = 12613 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 11569-12256 bp Zoom in on locus 1 x12 CRISPR array Location: 11569-12256 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 11569-12256 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 11569-12256 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)