CRISPRone

CRISPRone report for GCA_003632705.1_ASM363270v1

♦ Seq 1: QZXG01000036.1 Pseudomonas aeruginosa strain ENV-551 PA4_D3_NODE_23_length_86633_cov_25.4114_ID_45, whole genome shotgun sequence

⇒Summary: seq-len = 86633 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 139-1428 bp Zoom in on locus 1 x22 CRISPR array Location: 139-1428 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 139-1428 bp Num of repeats: 22 Spacers: s1-s21 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 139-1428 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QZXG01000040.1 Pseudomonas aeruginosa strain ENV-551 PA4_D3_NODE_22_length_93669_cov_24.9798_ID_43, whole genome shotgun sequence

⇒Summary: seq-len = 93669 bp; # of CRISPR array = 0; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 43870-46072 bp Zoom in on locus 1 Gene: cd09693:cas5 Type: Type-I Location: 43870-44277 bp Gene: unk Type: unknown Location: 44305-44991 bp Gene: COG2378:WYL Type: other Location: 45101-46072 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QZXG01000025.1 Pseudomonas aeruginosa strain ENV-551 PA4_D3_NODE_37_length_48882_cov_23.522_ID_73, whole genome shotgun sequence

⇒Summary: seq-len = 48882 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 139-10459 bp Zoom in on locus 1 x19 x10 CRISPR array Location: 139-1249 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 139-1249 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 1510-2484 bp Gene: COG1203:cas3 Type: Type-I Location: 2481-5711 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5769-7073 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7060-8043 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8054-9082 bp Gene: cd09739:cas6f Type: other Location: 9086-9649 bp CRISPR array Location: 9892-10459 bp Num of repeats: 10 Spacers: s19-s27 CRISPR array Location: 9892-10459 bp Num of repeats: 10 Spacers: s19-s27 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 139-1249 bp]: array | spacers
           [Locus range 9892-10459 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QZXG01000050.1 Pseudomonas aeruginosa strain ENV-551 PA4_D3_NODE_38_length_48529_cov_28.6519_ID_75, whole genome shotgun sequence

⇒Summary: seq-len = 48529 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 18482-28553 bp Zoom in on locus 1 Gene: cd09639:cas3 Type: Type-I Location: 18482-21607 bp Gene: unk Type: unknown Location: 21659-21889 bp Gene: unk Type: unknown Location: 21871-22533 bp Gene: pfam13280:WYL Type: other Location: 22671-23546 bp Gene: unk Type: unknown Location: 23675-25426 bp Gene: cd09696:cas3 Type: Subtype-I-U Location: 25374-28553 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)