CRISPRone

CRISPRone report for GCA_003632725.1_ASM363272v1

♦ Seq 1: QZXF01000013.1 Pseudomonas aeruginosa strain ENV-566 PA4_F3_NODE_36_length_48882_cov_28.3533_ID_71, whole genome shotgun sequence

⇒Summary: seq-len = 48882 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 139-10459 bp Zoom in on locus 1 x19 x10 CRISPR array Location: 139-1249 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 139-1249 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 1510-2484 bp Gene: COG1203:cas3 Type: Type-I Location: 2481-5711 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5769-7073 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7060-8043 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8054-9082 bp Gene: cd09739:cas6f Type: other Location: 9086-9649 bp CRISPR array Location: 9892-10459 bp Num of repeats: 10 Spacers: s19-s27 CRISPR array Location: 9892-10459 bp Num of repeats: 10 Spacers: s19-s27 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 139-1249 bp]: array | spacers
           [Locus range 9892-10459 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QZXF01000023.1 Pseudomonas aeruginosa strain ENV-566 PA4_F3_NODE_14_length_161353_cov_30.3627_ID_27, whole genome shotgun sequence

⇒Summary: seq-len = 161353 bp; # of CRISPR array = 0; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 111554-113756 bp Zoom in on locus 1 Gene: cd09693:cas5 Type: Type-I Location: 111554-111961 bp Gene: unk Type: unknown Location: 111989-112675 bp Gene: COG2378:WYL Type: other Location: 112785-113756 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QZXF01000070.1 Pseudomonas aeruginosa strain ENV-566 PA4_F3_NODE_9_length_205678_cov_30.7688_ID_17, whole genome shotgun sequence

⇒Summary: seq-len = 205678 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 85189-86477 bp Zoom in on locus 1 x22 CRISPR array Location: 85189-86477 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 85189-86477 bp Num of repeats: 22 Spacers: s1-s21 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 85189-86477 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QZXF01000037.1 Pseudomonas aeruginosa strain ENV-566 PA4_F3_NODE_37_length_48625_cov_35.308_ID_73, whole genome shotgun sequence

⇒Summary: seq-len = 48625 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 18482-28553 bp Zoom in on locus 1 Gene: cd09639:cas3 Type: Type-I Location: 18482-21607 bp Gene: unk Type: unknown Location: 21659-21889 bp Gene: unk Type: unknown Location: 21871-22533 bp Gene: pfam13280:WYL Type: other Location: 22671-23546 bp Gene: unk Type: unknown Location: 23675-25426 bp Gene: cd09696:cas3 Type: Subtype-I-U Location: 25374-28553 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)