CRISPRone

CRISPRone report for GCA_003633025.1_ASM363302v1

♦ Seq 1: QZZL01000224.1 Pseudomonas aeruginosa strain VET-64 PA2_B7_NODE_1_length_145406_cov_24.2848_ID_1, whole genome shotgun sequence

⇒Summary: seq-len = 145406 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 125766-134961 bp Zoom in on locus 1 x22 Gene: cd09641:cas3HD Type: Type-I Location: 125766-128000 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 128051-128725 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 128722-130485 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 130497-131366 bp Gene: pfam01930:cas4 Type: Type-I Location: 131385-132017 bp Gene: cd09721:cas1 Type: universal Location: 132021-133061 bp Gene: cd09725:cas2 Type: universal Location: 133071-133361 bp CRISPR array Location: 133543-134961 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 133543-134961 bp Num of repeats: 22 Spacers: s1-s21 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 133543-134961 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)