CRISPRone

CRISPRone report for GCA_003633065.1_ASM363306v1

♦ Seq 1: QZZI01000100.1 Pseudomonas aeruginosa strain HUM-331 NODE_90_length_1733_cov_38.7789_ID_179, whole genome shotgun sequence

⇒Summary: seq-len = 1733 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 110-1641 bp Zoom in on locus 1 x26 CRISPR array Location: 110-1641 bp Num of repeats: 26 Spacers: s1-s25 CRISPR array Location: 110-1641 bp Num of repeats: 26 Spacers: s1-s25 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 110-1641 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QZZI01000071.1 Pseudomonas aeruginosa strain HUM-331 NODE_22_length_108776_cov_26.3084_ID_43, whole genome shotgun sequence

⇒Summary: seq-len = 108776 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 110-1158 bp Zoom in on locus 1 x18 CRISPR array Location: 110-1158 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 110-1158 bp Num of repeats: 18 Spacers: s1-s17 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 110-1158 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QZZI01000088.1 Pseudomonas aeruginosa strain HUM-331 NODE_41_length_46523_cov_24.4253_ID_81, whole genome shotgun sequence

⇒Summary: seq-len = 46523 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 413-10177 bp Zoom in on locus 1 x18 Gene: cd09718:cas1 Type: universal Location: 413-1387 bp Gene: COG1203:cas3 Type: Type-I Location: 1384-4614 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5253-6371 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6358-7341 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7352-8380 bp Gene: cd09739:cas6f Type: other Location: 8384-8947 bp CRISPR array Location: 9130-10177 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 9130-10177 bp Num of repeats: 18 Spacers: s1-s17 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 9130-10177 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)