CRISPRone

CRISPRone report for GCA_003633075.1_ASM363307v1

♦ Seq 1: QZZE01000022.1 Pseudomonas aeruginosa strain HUM-321-D1 PA3_G10_NODE_64_length_14742_cov_44.4482_ID_127, whole genome shotgun sequence

⇒Summary: seq-len = 14742 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-5434 bp Zoom in on locus 1 x14 Gene: pfam09481:cas8e Type: Subtype-I-E Location: 2-403 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 400-930 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 940-2082 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 2084-2746 bp Gene: pfam08798:cas6e Type: other Location: 2721-3332 bp Gene: cd09719:cas1 Type: universal Location: 3359-4249 bp Gene: pfam09707:cas2 Type: universal Location: 4246-4545 bp CRISPR array Location: 4610-5434 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 4610-5434 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 4610-5434 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QZZE01000002.1 Pseudomonas aeruginosa strain HUM-321-D1 PA3_G10_NODE_83_length_6341_cov_51.1438_ID_165, whole genome shotgun sequence

⇒Summary: seq-len = 6341 bp; # of CRISPR array = 1; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1245-6340 bp Zoom in on locus 1 x7 CRISPR array Location: 1245-1640 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 1245-1640 bp Num of repeats: 7 Spacers: s1-s6 Gene: cd09641:cas3HD Type: Type-I Location: 2415-5096 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 5099-6340 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1245-1640 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)