CRISPRone

CRISPRone report for GCA_003633125.1_ASM363312v1

♦ Seq 1: QZZC01000067.1 Pseudomonas aeruginosa strain VET-24 NODE_5_length_257160_cov_24.8874_ID_9, whole genome shotgun sequence

⇒Summary: seq-len = 257160 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 113094-125132 bp Zoom in on locus 1 x18 x29 CRISPR array Location: 113094-114160 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 113094-114160 bp Num of repeats: 18 Spacers: s1-s17 Gene: cd09641:cas3HD Type: Type-I Location: 114934-117615 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 117618-119186 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 119183-119713 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 119723-120865 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 120867-121529 bp Gene: pfam08798:cas6e Type: other Location: 121504-122115 bp Gene: cd09719:cas1 Type: universal Location: 122142-123032 bp Gene: pfam09707:cas2 Type: universal Location: 123029-123328 bp CRISPR array Location: 123393-125132 bp Num of repeats: 29 Spacers: s18-s45 CRISPR array Location: 123393-125132 bp Num of repeats: 29 Spacers: s18-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 113094-114160 bp]: array | spacers
           [Locus range 123393-125132 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)