CRISPRone

CRISPRone report for GCA_003633245.1_ASM363324v1

♦ Seq 1: QZYF01000058.1 Pseudomonas aeruginosa strain HUM-301 PA3_G8_NODE_37_length_67830_cov_38.6334_ID_73, whole genome shotgun sequence

⇒Summary: seq-len = 67830 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36562-47006 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 36562-37250 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 36562-37250 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 37499-38062 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38066-39094 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39105-40088 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40075-41379 bp Gene: COG1203:cas3 Type: Type-I Location: 41437-44667 bp Gene: cd09718:cas1 Type: universal Location: 44664-45638 bp CRISPR array Location: 45899-47006 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 45899-47006 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36562-37250 bp]: array | spacers
           [Locus range 45899-47006 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QZYF01000088.1 Pseudomonas aeruginosa strain HUM-301 PA3_G8_NODE_23_length_114136_cov_42.6842_ID_45, whole genome shotgun sequence

⇒Summary: seq-len = 114136 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 71948-82533 bp Zoom in on locus 1 Gene: COG0640:csa3 Type: Subtype-I-A Location: 71948-72817 bp Gene: pfam00078:RT Type: other Location: 77726-78994 bp Gene: unk Type: unknown Location: 79144-79542 bp Gene: unk Type: unknown Location: 79726-79905 bp Gene: cls000170:cas4 Type: Type-I Location: 80989-82533 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)