CRISPRone

CRISPRone report for GCA_003633395.1_ASM363339v1

♦ Seq 1: QZXT01000038.1 Pseudomonas aeruginosa strain ENV-569 PA4_A4_NODE_29_length_76240_cov_43.4168_ID_57, whole genome shotgun sequence

⇒Summary: seq-len = 76240 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 50-618 bp Zoom in on locus 1 x10 CRISPR array Location: 50-618 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 50-618 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 50-618 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QZXT01000114.1 Pseudomonas aeruginosa strain ENV-569 PA4_A4_NODE_93_length_4910_cov_40.8961_ID_185, whole genome shotgun sequence

⇒Summary: seq-len = 4910 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4352-4860 bp Zoom in on locus 1 x9 CRISPR array Location: 4352-4860 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 4352-4860 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 4352-4860 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QZXT01000023.1 Pseudomonas aeruginosa strain ENV-569 PA4_A4_NODE_72_length_10402_cov_41.2517_ID_143, whole genome shotgun sequence

⇒Summary: seq-len = 10402 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 976-10067 bp Zoom in on locus 1 x12 CRISPR array Location: 976-1664 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 976-1664 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09718:cas1 Type: universal Location: 1928-2902 bp Gene: COG1203:cas3 Type: Type-I Location: 2899-6129 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6187-7491 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7478-8461 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8472-9500 bp Gene: cd09739:cas6f Type: other Location: 9504-10067 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 976-1664 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QZXT01000033.1 Pseudomonas aeruginosa strain ENV-569 PA4_A4_NODE_15_length_133939_cov_37.8186_ID_29, whole genome shotgun sequence

⇒Summary: seq-len = 133939 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 31344-31672 bp Zoom in on locus 1 x6 CRISPR array Location: 31344-31672 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 31344-31672 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 31344-31672 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QZXT01000032.1 Pseudomonas aeruginosa strain ENV-569 PA4_A4_NODE_8_length_173738_cov_46.0576_ID_15, whole genome shotgun sequence

⇒Summary: seq-len = 173738 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1083-1171 bp Zoom in on locus 1 x2 CRISPR array Location: 1083-1171 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 1083-1171 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1083-1171 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QZXT01000064.1 Pseudomonas aeruginosa strain ENV-569 PA4_A4_NODE_25_length_92668_cov_37.8533_ID_49, whole genome shotgun sequence

⇒Summary: seq-len = 92668 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1293-1980 bp Zoom in on locus 1 x12 CRISPR array Location: 1293-1980 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 1293-1980 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1293-1980 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)