CRISPRone

CRISPRone report for GCA_003633405.1_ASM363340v1

♦ Seq 1: QZXS01000061.1 Pseudomonas aeruginosa strain ENV-568 PA4_H3_NODE_31_length_70052_cov_23.2802_ID_61, whole genome shotgun sequence

⇒Summary: seq-len = 70052 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 55679-56007 bp Zoom in on locus 1 x6 CRISPR array Location: 55679-56007 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 55679-56007 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 55679-56007 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QZXS01000127.1 Pseudomonas aeruginosa strain ENV-568 PA4_H3_NODE_9_length_175912_cov_27.1016_ID_17, whole genome shotgun sequence

⇒Summary: seq-len = 175912 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 169617-171562 bp Zoom in on locus 1 x2 x9 CRISPR array Location: 169617-169704 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 169617-169704 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 171053-171562 bp Num of repeats: 9 Spacers: s2-s9 CRISPR array Location: 171053-171562 bp Num of repeats: 9 Spacers: s2-s9 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 169617-169704 bp]: array | spacers
           [Locus range 171053-171562 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QZXS01000073.1 Pseudomonas aeruginosa strain ENV-568 PA4_H3_NODE_22_length_107001_cov_27.1512_ID_43, whole genome shotgun sequence

⇒Summary: seq-len = 107001 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 105833-106400 bp Zoom in on locus 1 x10 CRISPR array Location: 105833-106400 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 105833-106400 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 105833-106400 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QZXS01000102.1 Pseudomonas aeruginosa strain ENV-568 PA4_H3_NODE_76_length_10363_cov_25.1015_ID_151, whole genome shotgun sequence

⇒Summary: seq-len = 10363 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 336-9427 bp Zoom in on locus 1 x12 Gene: cd09739:cas6f Type: other Location: 336-899 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 903-1931 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1942-2925 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2912-4216 bp Gene: COG1203:cas3 Type: Type-I Location: 4274-7504 bp Gene: cd09718:cas1 Type: universal Location: 7501-8475 bp CRISPR array Location: 8740-9427 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 8740-9427 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8740-9427 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QZXS01000080.1 Pseudomonas aeruginosa strain ENV-568 PA4_H3_NODE_7_length_197685_cov_24.5938_ID_13, whole genome shotgun sequence

⇒Summary: seq-len = 197685 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 106054-106741 bp Zoom in on locus 1 x12 CRISPR array Location: 106054-106741 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 106054-106741 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 106054-106741 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)