CRISPRone

CRISPRone report for GCA_003633435.1_ASM363343v1

♦ Seq 1: QZXP01000066.1 Pseudomonas aeruginosa strain ENV-480 PA4_B3_NODE_59_length_28992_cov_18.5383_ID_117, whole genome shotgun sequence

⇒Summary: seq-len = 28992 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 50-198 bp Zoom in on locus 1 x3 CRISPR array Location: 50-198 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 50-198 bp Num of repeats: 3 Spacers: s1-s2 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 50-198 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QZXP01000102.1 Pseudomonas aeruginosa strain ENV-480 PA4_B3_NODE_15_length_110784_cov_20.078_ID_29, whole genome shotgun sequence

⇒Summary: seq-len = 110784 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 110288-110735 bp Zoom in on locus 1 x8 CRISPR array Location: 110288-110735 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 110288-110735 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 110288-110735 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QZXP01000108.1 Pseudomonas aeruginosa strain ENV-480 PA4_B3_NODE_47_length_47245_cov_13.3973_ID_93, whole genome shotgun sequence

⇒Summary: seq-len = 47245 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 136-9779 bp Zoom in on locus 1 x16 Gene: cd09718:cas1 Type: universal Location: 136-1110 bp Gene: COG1203:cas3 Type: Type-I Location: 1107-4337 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 4974-6092 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6079-7062 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7073-8101 bp Gene: cd09739:cas6f Type: other Location: 8105-8668 bp CRISPR array Location: 8852-9779 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 8852-9779 bp Num of repeats: 16 Spacers: s1-s15 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8852-9779 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QZXP01000082.1 Pseudomonas aeruginosa strain ENV-480 PA4_B3_NODE_21_length_97593_cov_12.8353_ID_41, whole genome shotgun sequence

⇒Summary: seq-len = 97593 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 96841-97469 bp Zoom in on locus 1 x11 CRISPR array Location: 96841-97469 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 96841-97469 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 96841-97469 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QZXP01000078.1 Pseudomonas aeruginosa strain ENV-480 PA4_B3_NODE_19_length_102752_cov_20.2611_ID_37, whole genome shotgun sequence

⇒Summary: seq-len = 102752 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 101664-101751 bp Zoom in on locus 1 x2 CRISPR array Location: 101664-101751 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 101664-101751 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 101664-101751 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QZXP01000071.1 Pseudomonas aeruginosa strain ENV-480 PA4_B3_NODE_10_length_178396_cov_16.6391_ID_19, whole genome shotgun sequence

⇒Summary: seq-len = 178396 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 106060-106448 bp Zoom in on locus 1 x7 CRISPR array Location: 106060-106448 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 106060-106448 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 106060-106448 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)