CRISPRone

CRISPRone report for GCA_003633445.1_ASM363344v1

♦ Seq 1: QZXO01000101.1 Pseudomonas aeruginosa strain ENV-454 PA4_H2_NODE_82_length_12463_cov_27.7261_ID_163, whole genome shotgun sequence

⇒Summary: seq-len = 12463 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 11711-12339 bp Zoom in on locus 1 x11 CRISPR array Location: 11711-12339 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 11711-12339 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 11711-12339 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QZXO01000087.1 Pseudomonas aeruginosa strain ENV-454 PA4_H2_NODE_60_length_29755_cov_46.0854_ID_119, whole genome shotgun sequence

⇒Summary: seq-len = 29755 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 50-198 bp Zoom in on locus 1 x3 CRISPR array Location: 50-198 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 50-198 bp Num of repeats: 3 Spacers: s1-s2 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 50-198 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QZXO01000032.1 Pseudomonas aeruginosa strain ENV-454 PA4_H2_NODE_51_length_48186_cov_29.1143_ID_101, whole genome shotgun sequence

⇒Summary: seq-len = 48186 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 125-10720 bp Zoom in on locus 1 x12 x16 CRISPR array Location: 125-813 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 125-813 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09718:cas1 Type: universal Location: 1077-2051 bp Gene: COG1203:cas3 Type: Type-I Location: 2048-5278 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5915-7033 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7020-8003 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8014-9042 bp Gene: cd09739:cas6f Type: other Location: 9046-9609 bp CRISPR array Location: 9793-10720 bp Num of repeats: 16 Spacers: s12-s26 CRISPR array Location: 9793-10720 bp Num of repeats: 16 Spacers: s12-s26 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 125-813 bp]: array | spacers
           [Locus range 9793-10720 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QZXO01000030.1 Pseudomonas aeruginosa strain ENV-454 PA4_H2_NODE_32_length_82955_cov_36.8411_ID_63, whole genome shotgun sequence

⇒Summary: seq-len = 82955 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 81275-81664 bp Zoom in on locus 1 x7 CRISPR array Location: 81275-81664 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 81275-81664 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 81275-81664 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QZXO01000114.1 Pseudomonas aeruginosa strain ENV-454 PA4_H2_NODE_9_length_145036_cov_43.2763_ID_17, whole genome shotgun sequence

⇒Summary: seq-len = 145036 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1002-1090 bp Zoom in on locus 1 x2 CRISPR array Location: 1002-1090 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 1002-1090 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1002-1090 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QZXO01000066.1 Pseudomonas aeruginosa strain ENV-454 PA4_H2_NODE_18_length_110797_cov_43.7352_ID_35, whole genome shotgun sequence

⇒Summary: seq-len = 110797 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 50-498 bp Zoom in on locus 1 x8 CRISPR array Location: 50-498 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 50-498 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 50-498 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)