CRISPRone

CRISPRone report for GCA_003633495.1_ASM363349v1

♦ Seq 1: QZXH01000025.1 Pseudomonas aeruginosa strain ENV-567 PA4_G3_NODE_23_length_93529_cov_37.7445_ID_45, whole genome shotgun sequence

⇒Summary: seq-len = 93529 bp; # of CRISPR array = 0; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 43730-45932 bp Zoom in on locus 1 Gene: cd09693:cas5 Type: Type-I Location: 43730-44137 bp Gene: unk Type: unknown Location: 44165-44851 bp Gene: COG2378:WYL Type: other Location: 44961-45932 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QZXH01000063.1 Pseudomonas aeruginosa strain ENV-567 PA4_G3_NODE_39_length_47477_cov_35.3748_ID_77, whole genome shotgun sequence

⇒Summary: seq-len = 47477 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38424-47373 bp Zoom in on locus 1 x10 CRISPR array Location: 38424-38992 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 38424-38992 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09739:cas6f Type: other Location: 39234-39797 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39801-40829 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40840-41823 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41810-43114 bp Gene: COG1203:cas3 Type: Type-I Location: 43172-46402 bp Gene: cd09718:cas1 Type: universal Location: 46399-47373 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38424-38992 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QZXH01000033.1 Pseudomonas aeruginosa strain ENV-567 PA4_G3_NODE_63_length_1364_cov_39.6353_ID_125, whole genome shotgun sequence

⇒Summary: seq-len = 1364 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 139-1249 bp Zoom in on locus 1 x19 CRISPR array Location: 139-1249 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 139-1249 bp Num of repeats: 19 Spacers: s1-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 139-1249 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QZXH01000035.1 Pseudomonas aeruginosa strain ENV-567 PA4_G3_NODE_38_length_48743_cov_42.6618_ID_75, whole genome shotgun sequence

⇒Summary: seq-len = 48743 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 18482-28553 bp Zoom in on locus 1 Gene: cd09639:cas3 Type: Type-I Location: 18482-21607 bp Gene: unk Type: unknown Location: 21659-21889 bp Gene: unk Type: unknown Location: 21871-22533 bp Gene: pfam13280:WYL Type: other Location: 22671-23546 bp Gene: unk Type: unknown Location: 23675-25426 bp Gene: cd09696:cas3 Type: Subtype-I-U Location: 25374-28553 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QZXH01000048.1 Pseudomonas aeruginosa strain ENV-567 PA4_G3_NODE_9_length_217199_cov_38.4165_ID_17, whole genome shotgun sequence

⇒Summary: seq-len = 217199 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 85182-86470 bp Zoom in on locus 1 x22 CRISPR array Location: 85182-86470 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 85182-86470 bp Num of repeats: 22 Spacers: s1-s21 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 85182-86470 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)