CRISPRone

CRISPRone report for GCA_003669885.1_ASM366988v1

♦ Seq 1: NRBZ01000001.1 Pseudomonas aeruginosa strain Pa359 K47_S99_R1__paired__contig_1, whole genome shotgun sequence

⇒Summary: seq-len = 31295 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21643-31290 bp Zoom in on locus 1 x5 x7 x4 CRISPR array Location: 21643-21911 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 21643-21911 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 22111-22499 bp Num of repeats: 7 Spacers: s5-s10 CRISPR array Location: 22111-22499 bp Num of repeats: 7 Spacers: s5-s10 Gene: cd09718:cas1 Type: universal Location: 22759-23733 bp Gene: COG1203:cas3 Type: Type-I Location: 23730-26960 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 27018-28322 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 28309-29292 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 29303-30331 bp Gene: cd09739:cas6f Type: other Location: 30335-30898 bp CRISPR array Location: 31083-31290 bp Num of repeats: 4 Spacers: s11-s13 CRISPR array Location: 31083-31290 bp Num of repeats: 4 Spacers: s11-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21643-21911 bp]: array | spacers
           [Locus range 22111-22499 bp]: array | spacers
           [Locus range 31083-31290 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NRBZ01000006.1 Pseudomonas aeruginosa strain Pa359 K47_S99_R1__paired__contig_6, whole genome shotgun sequence

⇒Summary: seq-len = 258594 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 47963-49714 bp Zoom in on locus 1 Gene: mkCas0131:cas8b5 Type: Subtype-I-B Location: 47963-48979 bp Gene: cd06127:DEDDh Type: Type-I Location: 49109-49714 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)