CRISPRone

CRISPRone report for GCA_003698365.1_ASM369836v1

♦ Seq 1: MCMT01000019.1 Pseudomonas aeruginosa strain 6822 isolate NH57388A IPC88_19.1, whole genome shotgun sequence

⇒Summary: seq-len = 71501 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 22301-32854 bp Zoom in on locus 1 x19 x15 CRISPR array Location: 22301-23408 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 22301-23408 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 23669-24643 bp Gene: COG1203:cas3 Type: Type-I Location: 24640-27870 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 27928-29232 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 29219-30202 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 30213-31241 bp Gene: cd09739:cas6f Type: other Location: 31245-31808 bp CRISPR array Location: 31992-32854 bp Num of repeats: 15 Spacers: s19-s32 CRISPR array Location: 31992-32854 bp Num of repeats: 15 Spacers: s19-s32 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 22301-23408 bp]: array | spacers
           [Locus range 31992-32854 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MCMT01000007.1 Pseudomonas aeruginosa strain 6822 isolate NH57388A IPC88_7.1, whole genome shotgun sequence

⇒Summary: seq-len = 287691 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 268261-279257 bp Zoom in on locus 1 x18 x12 CRISPR array Location: 268261-269326 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 268261-269326 bp Num of repeats: 18 Spacers: s1-s17 Gene: pfam09707:cas2 Type: universal Location: 269391-269690 bp Gene: cd09719:cas1 Type: universal Location: 269687-270577 bp Gene: pfam08798:cas6e Type: other Location: 270604-271143 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 271190-271852 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 271854-272996 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 273006-273536 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 273533-275101 bp Gene: cd09641:cas3HD Type: Type-I Location: 275104-277785 bp CRISPR array Location: 278558-279257 bp Num of repeats: 12 Spacers: s18-s28 CRISPR array Location: 278558-279257 bp Num of repeats: 12 Spacers: s18-s28 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 268261-269326 bp]: array | spacers
           [Locus range 278558-279257 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)