CRISPRone

CRISPRone report for GCA_003698425.1_ASM369842v1

♦ Seq 1: MCMU01000010.1 Pseudomonas aeruginosa strain 0C4A isolate 679 IPC87_10.1, whole genome shotgun sequence

⇒Summary: seq-len = 303065 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 282697-294609 bp Zoom in on locus 1 x24 x21 CRISPR array Location: 282697-284128 bp Num of repeats: 24 Spacers: s1-s23 CRISPR array Location: 282697-284128 bp Num of repeats: 24 Spacers: s1-s23 Gene: pfam09707:cas2 Type: universal Location: 284193-284492 bp Gene: cd09719:cas1 Type: universal Location: 284489-285379 bp Gene: pfam08798:cas6e Type: other Location: 285406-285945 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 285992-286654 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 286656-287798 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 287808-288338 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 288335-289903 bp Gene: cd09641:cas3HD Type: Type-I Location: 289906-292587 bp CRISPR array Location: 293360-294609 bp Num of repeats: 21 Spacers: s24-s43 CRISPR array Location: 293360-294609 bp Num of repeats: 21 Spacers: s24-s43 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 282697-284128 bp]: array | spacers
           [Locus range 293360-294609 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)