CRISPRone

CRISPRone report for GCA_003698765.1_ASM369876v1

♦ Seq 1: MCMO01000019.1 Pseudomonas aeruginosa strain F462 isolate CPHL9433 IPC95_19.1, whole genome shotgun sequence

⇒Summary: seq-len = 33696 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2771-12919 bp Zoom in on locus 1 x36 CRISPR array Location: 2771-5128 bp Num of repeats: 36 Spacers: s1-s35 CRISPR array Location: 2771-5128 bp Num of repeats: 36 Spacers: s1-s35 Gene: cd09725:cas2 Type: universal Location: 5310-5600 bp Gene: cd09721:cas1 Type: universal Location: 5610-6650 bp Gene: pfam01930:cas4 Type: Type-I Location: 6654-7286 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 7305-8174 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 8171-9964 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 9961-10635 bp Gene: cd09641:cas3HD Type: Type-I Location: 10685-12919 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2771-5128 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MCMO01000004.1 Pseudomonas aeruginosa strain F462 isolate CPHL9433 IPC95_4.1, whole genome shotgun sequence

⇒Summary: seq-len = 452439 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 307694-308502 bp Zoom in on locus 1 x14 CRISPR array Location: 307694-308502 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 307694-308502 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 307694-308502 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: MCMO01000016.1 Pseudomonas aeruginosa strain F462 isolate CPHL9433 IPC95_16.1, whole genome shotgun sequence

⇒Summary: seq-len = 98656 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 33064-43392 bp Zoom in on locus 1 x13 x17 CRISPR array Location: 33064-33812 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 33064-33812 bp Num of repeats: 13 Spacers: s1-s12 Gene: cd09718:cas1 Type: universal Location: 34073-35047 bp Gene: COG1203:cas3 Type: Type-I Location: 35044-38283 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 38341-39645 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39632-40615 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 40626-41654 bp Gene: cd09739:cas6f Type: other Location: 41658-42221 bp CRISPR array Location: 42405-43392 bp Num of repeats: 17 Spacers: s13-s28 CRISPR array Location: 42405-43392 bp Num of repeats: 17 Spacers: s13-s28 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 33064-33812 bp]: array | spacers
           [Locus range 42405-43392 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)