CRISPRone

CRISPRone report for GCA_003698785.1_ASM369878v1

♦ Seq 1: MCMM01000007.1 Pseudomonas aeruginosa strain 4012(0) isolate C3719 IPC1256_7.1, whole genome shotgun sequence

⇒Summary: seq-len = 312829 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 301920-311938 bp Zoom in on locus 1 x13 x12 CRISPR array Location: 301920-302668 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 301920-302668 bp Num of repeats: 13 Spacers: s1-s12 Gene: cd09739:cas6f Type: other Location: 302851-303414 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 303418-304446 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 304457-305440 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 305427-306731 bp Gene: COG1203:cas3 Type: Type-I Location: 306789-310019 bp Gene: cd09718:cas1 Type: universal Location: 310016-310990 bp CRISPR array Location: 311251-311938 bp Num of repeats: 12 Spacers: s13-s23 CRISPR array Location: 311251-311938 bp Num of repeats: 12 Spacers: s13-s23 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 301920-302668 bp]: array | spacers
           [Locus range 311251-311938 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: MCMM01000001.1 Pseudomonas aeruginosa strain 4012(0) isolate C3719 IPC1256_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 900575 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 409796-410845 bp Zoom in on locus 1 x18 CRISPR array Location: 409796-410845 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 409796-410845 bp Num of repeats: 18 Spacers: s1-s17 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 409796-410845 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)