CRISPRone

CRISPRone report for GCA_003713085.1_ASM371308v1

♦ Seq 1: CP033432.1 Pseudomonas aeruginosa strain BA15561 chromosome, complete genome

⇒Summary: seq-len = 6793961 bp; # of CRISPR array = 3; # of cas gene = 10  (type I, IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1804058-1814367 bp 2 Locus 2: 3171426-3171873 bp 3 Locus 3: 5161831-5171692 bp Zoom in on locus 1 x13 x17 Zoom in on locus 2 x8 Zoom in on locus 3 CRISPR array Location: 1804058-1804806 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 1804058-1804806 bp Num of repeats: 13 Spacers: s1-s12 Gene: cd09718:cas1 Type: universal Location: 1805057-1806031 bp Gene: COG1203:cas3 Type: Type-I Location: 1806028-1809258 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 1809316-1810620 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1810607-1811590 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1811601-1812629 bp Gene: cd09739:cas6f Type: other Location: 1812633-1813196 bp CRISPR array Location: 1813380-1814367 bp Num of repeats: 17 Spacers: s13-s28 CRISPR array Location: 1813380-1814367 bp Num of repeats: 17 Spacers: s13-s28 CRISPR array Location: 3171426-3171873 bp Num of repeats: 8 Spacers: s29-s35 CRISPR array Location: 3171426-3171873 bp Num of repeats: 8 Spacers: s29-s35 Gene: mkCas0115:csx3 Type: other Location: 5161831-5163441 bp Gene: pfam13280:WYL Type: other Location: 5163602-5164618 bp Gene: unk Type: unknown Location: 5165890-5166069 bp Gene: unk Type: unknown Location: 5166379-5166912 bp Gene: pfam13280:WYL Type: other Location: 5166927-5167802 bp Gene: unk Type: unknown Location: 5167933-5168220 bp Gene: unk Type: unknown Location: 5168355-5168933 bp Gene: COG1199:DinG Type: Subtype-IV-A Location: 5169326-5171692 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1804058-1804806 bp]: array | spacers
           [Locus range 1813380-1814367 bp]: array | spacers
           [Locus range 3171426-3171873 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)