CRISPRone

CRISPRone report for GCA_003798105.1_ASM379810v1

♦ Seq 1: CP033684.1 Pseudomonas aeruginosa strain H26027 chromosome, complete genome

⇒Summary: seq-len = 7079598 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1681819-1682568 bp 2 Locus 2: 3254651-3265250 bp Zoom in on locus 1 x13 Zoom in on locus 2 x19 x10 CRISPR array Location: 1681819-1682568 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 1681819-1682568 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 3254651-3255759 bp Num of repeats: 19 Spacers: s13-s30 CRISPR array Location: 3254651-3255759 bp Num of repeats: 19 Spacers: s13-s30 Gene: cd09739:cas6f Type: other Location: 3255942-3256505 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 3256509-3257537 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 3257548-3258531 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3258518-3259819 bp Gene: COG1203:cas3 Type: Type-I Location: 3260230-3263460 bp Gene: cd09718:cas1 Type: universal Location: 3263457-3264431 bp CRISPR array Location: 3264683-3265250 bp Num of repeats: 10 Spacers: s31-s39 CRISPR array Location: 3264683-3265250 bp Num of repeats: 10 Spacers: s31-s39 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1681819-1682568 bp]: array | spacers
           [Locus range 3254651-3255759 bp]: array | spacers
           [Locus range 3264683-3265250 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)