CRISPRone

CRISPRone report for GCA_003798125.1_ASM379812v1

♦ Seq 1: CP033686.1 Pseudomonas aeruginosa strain H25883 chromosome, complete genome

⇒Summary: seq-len = 6706800 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1537900-1538229 bp 2 Locus 2: 2938868-2948817 bp Zoom in on locus 1 x6 Zoom in on locus 2 x16 x8 CRISPR array Location: 1537900-1538229 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 1537900-1538229 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 2938868-2939796 bp Num of repeats: 16 Spacers: s6-s20 CRISPR array Location: 2938868-2939796 bp Num of repeats: 16 Spacers: s6-s20 Gene: cd09739:cas6f Type: other Location: 2939979-2940542 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2940546-2941574 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2941585-2942568 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2942555-2943859 bp Gene: COG1203:cas3 Type: Type-I Location: 2943917-2947147 bp Gene: cd09718:cas1 Type: universal Location: 2947144-2948118 bp CRISPR array Location: 2948370-2948817 bp Num of repeats: 8 Spacers: s21-s27 CRISPR array Location: 2948370-2948817 bp Num of repeats: 8 Spacers: s21-s27 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1537900-1538229 bp]: array | spacers
           [Locus range 2938868-2939796 bp]: array | spacers
           [Locus range 2948370-2948817 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)