CRISPRone

CRISPRone report for GCA_003798145.1_ASM379814v1

♦ Seq 1: CP033685.1 Pseudomonas aeruginosa strain H26023 chromosome, complete genome

⇒Summary: seq-len = 6729216 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2998247-3007113 bp 2 Locus 2: 3045868-3046975 bp Zoom in on locus 1 x12 Zoom in on locus 2 x19 CRISPR array Location: 2998247-2998935 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 2998247-2998935 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 2999184-2999747 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2999751-3000779 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 3000790-3001773 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3001760-3003064 bp Gene: COG1203:cas3 Type: Type-I Location: 3003122-3006352 bp Gene: COG1518:cas1 Type: universal Location: 3006349-3007113 bp CRISPR array Location: 3045868-3046975 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 3045868-3046975 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2998247-2998935 bp]: array | spacers
           [Locus range 3045868-3046975 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)