CRISPRone

CRISPRone report for GCA_003833485.1_ASM383348v1

♦ Seq 1: NSMY01000012.1 Pseudomonas aeruginosa strain PA-W44 IPC1301_12.1, whole genome shotgun sequence

⇒Summary: seq-len = 227173 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 180865-191473 bp Zoom in on locus 1 x21 x8 CRISPR array Location: 180865-182093 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 180865-182093 bp Num of repeats: 21 Spacers: s1-s20 Gene: cd09718:cas1 Type: universal Location: 182353-183327 bp Gene: COG1203:cas3 Type: Type-I Location: 183324-186554 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 186965-188266 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 188253-189236 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 189247-190275 bp Gene: cd09739:cas6f Type: other Location: 190279-190842 bp CRISPR array Location: 191026-191473 bp Num of repeats: 8 Spacers: s21-s27 CRISPR array Location: 191026-191473 bp Num of repeats: 8 Spacers: s21-s27 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 180865-182093 bp]: array | spacers
           [Locus range 191026-191473 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)