CRISPRone

CRISPRone report for GCA_003833545.1_ASM383354v1

♦ Seq 1: NSNE01000033.1 Pseudomonas aeruginosa strain PA-W36 IPC1295_33.1, whole genome shotgun sequence

⇒Summary: seq-len = 46704 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 35592-46191 bp Zoom in on locus 1 x19 x10 CRISPR array Location: 35592-36700 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 35592-36700 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 36883-37446 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 37450-38478 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 38489-39472 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 39459-40760 bp Gene: COG1203:cas3 Type: Type-I Location: 41171-44401 bp Gene: cd09718:cas1 Type: universal Location: 44398-45372 bp CRISPR array Location: 45624-46191 bp Num of repeats: 10 Spacers: s19-s27 CRISPR array Location: 45624-46191 bp Num of repeats: 10 Spacers: s19-s27 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 35592-36700 bp]: array | spacers
           [Locus range 45624-46191 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: NSNE01000014.1 Pseudomonas aeruginosa strain PA-W36 IPC1295_14.1, whole genome shotgun sequence

⇒Summary: seq-len = 209965 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 208822-209450 bp Zoom in on locus 1 x11 CRISPR array Location: 208822-209450 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 208822-209450 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 208822-209450 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)